STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBRATIS_20510Translation initiation factor SUI1. (91 aa)    
Predicted Functional Partners:
TUBRATIS_21790
Anaphase-promoting complex subunit 11.
    
 0.995
TUBRATIS_13740
Uncharacterized protein.
   
 0.995
A0A437ANG4
Cyclosome anaphase-promoting complex.
   
 0.995
A0A437ANK7
Anaphase-promoting complex subunit 10.
   
 0.995
A0A437AQF2
Cell division control CDC23.
   
 0.995
TUBRATIS_24880
Nuclear scaffolding protein.
   
 0.968
TUBRATIS_21330
Nuclear scaffolding protein.
   
 0.968
ALA1
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.
   
 0.968
TUBRATIS_21070
WD40 domain-containing protein.
    
 0.966
A0A437APS8
WD40 domain-containing protein.
    
 0.966
Your Current Organism:
Tubulinosema ratisbonensis
NCBI taxonomy Id: 291195
Other names: T. ratisbonensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.