STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBRATIS_18990Polyadenylate-binding (RRM superfamily) protein. (159 aa)    
Predicted Functional Partners:
TUBRATIS_21830
Transcription initiation factor 4F subunit.
   
 0.968
TUBRATIS_15710
Eukaryotic translation initiation factor IF4E; Belongs to the eukaryotic initiation factor 4E family.
    
 0.902
A0A437APU3
Cleavage stimulation factor.
    
 0.887
TUBRATIS_19590
Small RNA-binding pol III transcript.
   
 0.856
TUBRATIS_11940
RNA-binding motif X chromosome-like protein.
   
 0.856
TUBRATIS_15220
Eukaryotic translation initiation factor 4A; Belongs to the DEAD box helicase family.
   
 0.855
TUBRATIS_15190
Dehydrogenase.
    
  0.850
TUBRATIS_19050
Splicing factor 3B subunit.
   
  0.840
TUBRATIS_26930
F-box domain-containing protein.
     
 0.833
TUBRATIS_18830
Ca2+-binding actin-bundling fimbrin plastin.
    
  0.829
Your Current Organism:
Tubulinosema ratisbonensis
NCBI taxonomy Id: 291195
Other names: T. ratisbonensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.