STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBRATIS_17570Nop56p-like nucleolar protein. (408 aa)    
Predicted Functional Partners:
TUBRATIS_25890
Ribosomal S6.
   
 0.999
TUBRATIS_15650
Nop5-like nucleolar protein.
  
0.999
TUBRATIS_12390
Fibrillarin.
   
 0.999
TUBRATIS_25480
40S ribosome biogenesis GTP-binding.
   
 
 0.990
TUBRATIS_20230
Centromere microtubule binding protein.
   
 
 0.989
TUBRATIS_17250
tRNA(Met) cytidine acetyltransferase.
   
 
 0.981
TUBRATIS_17340
WD40 domain-containing periodic tryptophan 2.
   
 
 0.980
TUBRATIS_23500
HS6-type ribosomal protein.
   
 0.977
TUBRATIS_30840
Uncharacterized protein.
   
 
 0.976
TUBRATIS_23530
U3 small nucleolar RNA-associated 14 protein.
   
 0.974
Your Current Organism:
Tubulinosema ratisbonensis
NCBI taxonomy Id: 291195
Other names: T. ratisbonensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.