STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBRATIS_16870Uncharacterized protein. (396 aa)    
Predicted Functional Partners:
TUBRATIS_25060
BRCT domain-containing protein.
   
 0.891
A0A437ANG4
Cyclosome anaphase-promoting complex.
    
  0.743
A0A437AQ99
Exportin 1.
    
 0.730
TUBRATIS_26670
Transmembrane 62 protein.
   
 0.721
A0A437APP4
Transmembrane 62 protein.
   
 0.721
TUBRATIS_26880
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.683
A0A437AQ48
Chitin deacetylase.
    
 0.665
TUBRATIS_12470
Guanylate kinase.
    
 0.655
TUBRATIS_24380
Exported (PHISTc).
    
 0.648
A0A437APG4
Glycerophosphoryldiester phosphodiesterase.
   
 0.627
Your Current Organism:
Tubulinosema ratisbonensis
NCBI taxonomy Id: 291195
Other names: T. ratisbonensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.