STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBRATIS_18350Exocyst complex subunit SEC6. (577 aa)    
Predicted Functional Partners:
TUBRATIS_22050
Exocyst complex component Sec3.
    
 0.938
A0A437APP0
Exocyst complex component Sec3.
    
 0.938
A0A437ANP2
Sec1-like intracellular trafficking protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.779
TUBRATIS_17100
Rab11-like GTPase.
    
 0.762
A0A437APT0
Myosin heavy chain; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.543
A0A437ANT8
V-SNARE coiled-coil homology domain-containing protein.
    
 0.513
TUBRATIS_30210
t-SNARE complex subunit/syntaxin.
    
 0.453
TUBRATIS_28140
Rho GTPase.
    
 0.449
TUBRATIS_10520
GTP-binding rho1.
    
 0.449
A0A437ANZ2
Rho-related GTP-binding protein.
    
 0.449
Your Current Organism:
Tubulinosema ratisbonensis
NCBI taxonomy Id: 291195
Other names: T. ratisbonensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.