STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBRATIS_16670Vacuolar atp synthase subunit d. (212 aa)    
Predicted Functional Partners:
TUBRATIS_16960
Vacuolar-type H+-ATPase.
  
 0.999
A0A437AN56
Vacuolar ATP synthase catalytic subunit A.
  
 0.999
A0A437APY9
Vacuolar ATP synthase subunit E.
  
 0.999
A0A437AQI9
V-type F subunit.
  
 0.998
TUBRATIS_18030
V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
   
 0.997
A0A437AQ34
Vacuolar H+-ATPase V1 sector subunit H.
   
 0.996
A0A437ANA6
V-type proton ATPase subunit B.
 
 0.993
A0A437ANB1
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
  
 0.991
TUBRATIS_28880
Putative vacuolar ATP synthase.
  
 0.988
TUBRATIS_13720
V-type ATP synthase subunit K.
  
 0.988
Your Current Organism:
Tubulinosema ratisbonensis
NCBI taxonomy Id: 291195
Other names: T. ratisbonensis
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