STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBRATIS_15710Eukaryotic translation initiation factor IF4E; Belongs to the eukaryotic initiation factor 4E family. (190 aa)    
Predicted Functional Partners:
TUBRATIS_21830
Transcription initiation factor 4F subunit.
   
 0.995
TUBRATIS_22980
Ran GTPase activating protein.
   
 
 0.991
TUBRATIS_15220
Eukaryotic translation initiation factor 4A; Belongs to the DEAD box helicase family.
   
 0.956
A0A437APT2
Polyadenylate binding protein 2.
   
 0.948
TUBRATIS_18990
Polyadenylate-binding (RRM superfamily) protein.
    
 0.902
TUBRATIS_30560
Putative mRNA cap-binding protein; Belongs to the eukaryotic initiation factor 4E family.
     
 0.868
TUBRATIS_19460
Eukaryotic translation initiation factor 5.
   
 0.862
TUBRATIS_19590
Small RNA-binding pol III transcript.
   
 0.818
A0A437APX0
Chromodomain-helicase-DNA-binding 9.
    
 
 0.806
TUBRATIS_11940
RNA-binding motif X chromosome-like protein.
    
 0.775
Your Current Organism:
Tubulinosema ratisbonensis
NCBI taxonomy Id: 291195
Other names: T. ratisbonensis
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