STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBRATIS_15300PWWP domain-containing protein. (309 aa)    
Predicted Functional Partners:
TUBRATIS_13310
Cyclin K.
   
 
 0.849
TUBRATIS_23550
CMGC CDK CRK7 kinase.
    
 
 0.781
A0A437AQ60
Cyclin-dependent kinase; Belongs to the protein kinase superfamily.
    
 
 0.781
TUBRATIS_27660
Spore wall and anchoring disk complex protein.
    
 
 0.635
TUBRATIS_26290
Histone-lysine N-methyltransferase.
    
 
 0.635
A0A437AQQ4
SET domain-containing protein.
    
 
 0.569
A0A437AP66
Histone superfamily protein; Belongs to the histone H2B family.
    
   0.508
TUBRATIS_15590
Histone H2A.
    
   0.448
TUBRATIS_27900
DnaJ-like protein.
    
   0.426
TUBRATIS_18230
DNAJ-like protein.
    
   0.426
Your Current Organism:
Tubulinosema ratisbonensis
NCBI taxonomy Id: 291195
Other names: T. ratisbonensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.