STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBRATIS_13150Inositol metabolism VAMP-associated. (153 aa)    
Predicted Functional Partners:
TUBRATIS_14600
SYNTAXIN like protein.
    
 0.624
A0A437ANT8
V-SNARE coiled-coil homology domain-containing protein.
    
 0.540
TUBRATIS_30210
t-SNARE complex subunit/syntaxin.
    
 0.528
A0A437APU4
Phosphoinositide polyphosphatase.
    
 
 0.524
TUBRATIS_12570
Ca2+-dependent lipid-binding.
    
 
 0.487
A0A437AN22
Ubiquitin conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.475
TUBRATIS_28930
Phosphatidylinositol 4-kinase.
    
 
 0.464
TUBRATIS_28920
Phosphatidylinositol 4-kinase; Belongs to the PI3/PI4-kinase family.
    
 
 0.464
TUBRATIS_25060
BRCT domain-containing protein.
    
 
 0.421
A0A437APG4
Glycerophosphoryldiester phosphodiesterase.
    
 
 0.421
Your Current Organism:
Tubulinosema ratisbonensis
NCBI taxonomy Id: 291195
Other names: T. ratisbonensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.