STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBRATIS_10670ATP-binding Cassette (ABC) Superfamily. (174 aa)    
Predicted Functional Partners:
TUBRATIS_27340
Arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
      0.849
A0A437AQ95
Putative ABC transporter ATP-binding.
  
 0.784
TUBRATIS_28400
Heat shock transcription factor.
    
 0.648
TUBRATIS_17720
HSF_DOMAIN domain-containing protein.
    
 0.648
TUBRATIS_30520
ARID/BRIGHT DNA binding domain protein.
    
 
 0.439
TUBRATIS_10740
Transmembrane adaptor Erv26.
    
 0.401
Your Current Organism:
Tubulinosema ratisbonensis
NCBI taxonomy Id: 291195
Other names: T. ratisbonensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.