STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A437ANM4Karyopherin beta. (829 aa)    
Predicted Functional Partners:
TUBRATIS_20110
Importin subunit alpha; Belongs to the importin alpha family.
   
 0.992
TUBRATIS_22980
Ran GTPase activating protein.
   
 0.985
A0A437AN16
Small GTP-binding domain protein.
   
 0.980
TUBRATIS_14100
Nonsense-mediated mRNA decay 5 protein.
   
 
 0.878
TUBRATIS_24520
Nuclear pore Nup98 component.
   
 0.845
TUBRATIS_28500
Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family.
    
   0.838
TUBRATIS_20230
Centromere microtubule binding protein.
    
   0.838
TUBRATIS_30550
Nuclear cap-binding protein subunit 2.
   
   0.772
TUBRATIS_28700
Peptidase C48 domain-containing protein.
   
 
 0.753
A0A437AQD0
Nucleoporin Nic96.
    
 0.746
Your Current Organism:
Tubulinosema ratisbonensis
NCBI taxonomy Id: 291195
Other names: T. ratisbonensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.