STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A437ANS6Microsomal signal peptidase Spc12. (86 aa)    
Predicted Functional Partners:
TUBRATIS_27520
Microsomal signal peptidase subunit SPC25-like.
   
 0.984
A0A437APJ8
Signal peptidase complex subunit.
   
 0.977
A0A437APV9
Signal peptidase complex catalytic subunit SEC11.
   
 0.963
TUBRATIS_18950
Membrane integral protein.
   
    0.555
TUBRATIS_24690
Signal recognition particle Srp19.
   
  
 0.548
TUBRATIS_29390
Translocation protein SEC62-like.
    
 
 0.490
A0A437AQ63
Signal recognition particle GTPase.
      
 0.465
TUBRATIS_10310
Pre translocase subunit Sec63.
    
 
 0.449
TUBRATIS_10210
Translation machinery-associated 20-like protein.
   
  
 0.402
Your Current Organism:
Tubulinosema ratisbonensis
NCBI taxonomy Id: 291195
Other names: T. ratisbonensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.