STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A437API6SEC18-like vesicular fusionprotein. (612 aa)    
Predicted Functional Partners:
TUBRATIS_28400
Heat shock transcription factor.
    
 0.988
TUBRATIS_17720
HSF_DOMAIN domain-containing protein.
    
 0.988
A0A437AN58
Synaptic transmission and general secretion protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.942
TUBRATIS_10240
SNARE TLG2 Syntaxin 16.
   
 0.941
TUBRATIS_30210
t-SNARE complex subunit/syntaxin.
    
 0.922
A0A437ANT8
V-SNARE coiled-coil homology domain-containing protein.
   
 0.919
A0A437ANU2
Nuclear pore protein.
    
 0.903
TUBRATIS_10170
Synaptobrevin VAMP.
    
 0.877
A0A437ANH8
Synaptobrevin VAMP.
    
 0.871
TUBRATIS_14600
SYNTAXIN like protein.
    
 0.865
Your Current Organism:
Tubulinosema ratisbonensis
NCBI taxonomy Id: 291195
Other names: T. ratisbonensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.