Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A437API6SEC18-like vesicular fusionprotein. (612 aa)    
Predicted Functional Partners:
A0A437AN58
Synaptic transmission and general secretion protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.987
A0A437ANH8
Synaptobrevin VAMP.
    
 0.974
TUBRATIS_10240
SNARE TLG2 Syntaxin 16.
   
 0.973
TUBRATIS_10170
Synaptobrevin VAMP.
    
 0.973
TUBRATIS_14600
SYNTAXIN like protein.
    
 0.970
A0A437APH9
Sec1 family transport protein.
    
 0.956
A0A437ANT8
V-SNARE coiled-coil homology domain-containing protein.
   
 0.950
TUBRATIS_30210
t-SNARE complex subunit/syntaxin.
    
 0.949
TUBRATIS_12910
Vesicular transport protein.
    
 0.946
TUBRATIS_24900
26S proteasome regulatory complex.
   
  0.915
Your Current Organism:
Tubulinosema ratisbonensis
NCBI taxonomy Id: 291195
Other names: T. ratisbonensis
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