STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A437APP4Transmembrane 62 protein. (509 aa)    
Predicted Functional Partners:
A0A437APG4
Glycerophosphoryldiester phosphodiesterase.
   
 0.912
TUBRATIS_25060
BRCT domain-containing protein.
   
 0.891
TUBRATIS_19530
60S ribosomal.
   
 0.721
TUBRATIS_19540
Uncharacterized protein.
   
 0.721
TUBRATIS_16870
Uncharacterized protein.
   
 0.721
TUBRATIS_11750
Uncharacterized protein.
   
 0.721
A0A437AP26
Uncharacterized protein.
   
 0.721
A0A437ANR6
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 0.686
A0A437AQ48
Chitin deacetylase.
    
 0.665
TUBRATIS_18640
Actin.
    
 0.655
Your Current Organism:
Tubulinosema ratisbonensis
NCBI taxonomy Id: 291195
Other names: T. ratisbonensis
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