STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A437AQ94Transcriptional regulation complex subunit not5. (203 aa)    
Predicted Functional Partners:
TUBRATIS_13200
Cell differentiation Rcd1.
    
 0.989
A0A437ANY1
NOT1-like general negative regulator of transcription subunit 1.
    
 0.989
A0A437APA1
Mrna deadenylase subunit.
    
 0.976
TUBRATIS_24010
Transcriptional repressor.
   
 0.972
TUBRATIS_18450
mRNA deadenylase.
    
 0.952
TUBRATIS_30460
General negative regulator of transcription.
    
 0.938
A0A437APR4
General negative regulator of transcription.
    
 0.938
A0A437APD2
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.725
TUBRATIS_21240
Exosome complex exonuclease Rrp41.
    
   0.716
A0A437AQX3
Histone acetyltransferase complex SAGA AD.
    
   0.716
Your Current Organism:
Tubulinosema ratisbonensis
NCBI taxonomy Id: 291195
Other names: T. ratisbonensis
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