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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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co-expression
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[Homology]
Score
thrSthreonyl-tRNA synthetase; Ortholog to Escherichia coli bnum: b1719; MultiFun: Information transfer 2.3.1. (408 aa)    
Predicted Functional Partners:
pheT
Phenylalanine tRNA synthetase, beta-subunit; Ortholog to Escherichia coli bnum: b1713; MultiFun: Information transfer 2.3.1; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
 
 
 0.916
infC
Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.
 
  
 0.914
rplT
50S ribosomal subunit protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
 
 
 
 0.881
rpsA
30S ribosomal subunit protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.
 
   0.877
valS
Valine tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
 
 
 0.819
rpmA
50S ribosomal subunit protein L27; Ortholog to Escherichia coli bnum: b3185; MultiFun: Cell structure 6.6; Information transfer 2.3.2, 2.3.8; Belongs to the bacterial ribosomal protein bL27 family.
    
 
 0.804
pheS
Phenylalanine tRNA synthetase, alpha-subunit; Ortholog to Escherichia coli bnum: b1714; MultiFun: Information transfer 2.3.1; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
 
 
 0.804
leuS
leucyl-tRNA synthetase; Ortholog to Escherichia coli bnum: b0642; MultiFun: Information transfer 2.3.1; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.797
proS
prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]
  
 
 0.796
lysS
lysyl-tRNA synthetase; Ortholog to Escherichia coli bnum: b2890; MultiFun: Information transfer 2.3.1; Belongs to the class-II aminoacyl-tRNA synthetase family.
   
 
 0.790
Your Current Organism:
Blochmannia pennsylvanicus
NCBI taxonomy Id: 291272
Other names: C. Blochmannia pennsylvanicus str. BPEN, Candidatus Blochmannia pennsylvanicus BPEN, Candidatus Blochmannia pennsylvanicus str. BPEN, Candidatus Blochmannia pennsylvanicus strain BPEN
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