Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
virKVirK protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (171 aa)    
Predicted Functional Partners:
XOO0331
Transposase and inactivated derivatives; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
      
 0.681
XOO3715
Transposase and inactivated derivatives; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
      
 0.681
ybdR
Zn-dependent alcohol dehydrogenase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
      
 0.645
cutC
Copper homeostasis protein; Participates in the control of copper homeostasis. Belongs to the CutC family.
      
 0.645
fucA1
alpha-L-fucosidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
      
 0.485
pheA-2
Prephenate dehydratase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
      
 0.485
tufB
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
      
 0.480
XOO0132
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
       0.442
XOO0130
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
       0.409
pheA
Prephenate dehydratase; Catalyzes the Claisen rearrangement of chorismate to prephenate.
      
 0.400
Your Current Organism:
Xanthomonas oryzae
NCBI taxonomy Id: 291331
Other names: X. oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae str. KACC 10331, Xanthomonas oryzae pv. oryzae strain KACC 10331
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.