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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cioBCyanide insensitive terminal oxidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (338 aa)    
Predicted Functional Partners:
cioA
Cyanide insensitive terminal oxidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 0.987
CydA
Cytochrome bd-type quinol oxidase, subunit 1; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 0.946
cydA
Cytochrome D ubiquinol oxidase subunit I; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 0.925
qxtB
Quinol oxidase subunit II; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
  
 
0.901
cydB
Cytochrome D ubiquinol oxidase subunit II; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
     
  0.900
cydA-2
Cytochrome D ubiquinol oxidase subunit I; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
 
 0.773
strW
Transport protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
  
 0.653
cydC
ABC transporter ATP-binding protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
  
 0.622
XOO0640
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
       0.588
XOO0636
Putative transposase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
       0.576
Your Current Organism:
Xanthomonas oryzae
NCBI taxonomy Id: 291331
Other names: X. oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae str. KACC 10331, Xanthomonas oryzae pv. oryzae strain KACC 10331
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