Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
XOO0711Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the UPF0234 family. (182 aa)    
Predicted Functional Partners:
XOO1138
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
      
 0.773
pepN-3
Aminopeptidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
     
 0.642
XOO0707
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
     0.611
ycgR
Predicted glycosyltransferase; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility.
      
 0.610
pilZ
Type IV fimbriae assembly protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
      
 0.602
RhaT
Permeases of the drug/metabolite transporter (DMT) superfamily; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
       0.562
abc
ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
       0.562
yaeE
ABC transporter permease; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
       0.562
XOO0710
Histidine kinase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
   
   0.436
NlpA
ABC-type metal ion transport system, periplasmic component/surface antigen; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the nlpA lipoprotein family.
  
    0.435
Your Current Organism:
Xanthomonas oryzae
NCBI taxonomy Id: 291331
Other names: X. oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae str. KACC 10331, Xanthomonas oryzae pv. oryzae strain KACC 10331
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.