STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XOO0930Predicted periplasmic ligand-binding sensor domain; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (170 aa)    
Predicted Functional Partners:
XOO3021
Two-component system sensor protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
 
   0.773
XOO1829
Histidine kinase-response regulator hybrid protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
 
   0.737
XOO0931
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
       0.658
XOO0934
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
      0.632
FepA
Outer membrane receptor for ferrienterochelin and colicins; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.597
XOO0933
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
      0.588
XOO0347
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.514
FimV
Tfp pilus assembly protein FimV; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.494
ParE-3
Plasmid stabilization system protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.483
AcrR
Transcriptional regulator; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
       0.479
Your Current Organism:
Xanthomonas oryzae
NCBI taxonomy Id: 291331
Other names: X. oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae str. KACC 10331, Xanthomonas oryzae pv. oryzae strain KACC 10331
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.