Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dhs1Family II 2-keto-3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (526 aa)    
Predicted Functional Partners:
aroB
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.
 
  
 0.934
aroG
Phospho-2-dehydro-3-deoxyheptonate aldolase, phe-sensitive; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
     
 0.924
tktA
Transketolase 1; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
     
 0.827
pheA-2
Prephenate dehydratase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
   
 
 0.801
XOO3412
Fructose-bisphosphate aldolase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the class I fructose-bisphosphate aldolase family.
     
  0.800
talB
Transaldolase B; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
     
  0.800
pheA
Prephenate dehydratase; Catalyzes the Claisen rearrangement of chorismate to prephenate.
   
 
 0.754
MscS
Small-conductance mechanosensitive channel; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
       0.620
cirA
Colicin I receptor; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
       0.560
tyrA
Chorismate mutase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
     
 0.472
Your Current Organism:
Xanthomonas oryzae
NCBI taxonomy Id: 291331
Other names: X. oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae str. KACC 10331, Xanthomonas oryzae pv. oryzae strain KACC 10331
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