Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
XOO1096Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (420 aa)    
Predicted Functional Partners:
XOO2392
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.651
aspC
Aminotransferase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
       0.612
XOO2391
FOG: FHA domain; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.593
TesA-2
Lysophospholipase L1 and related esterases; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
       0.588
nonF
NonF-related protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
    0.582
kdkA
Conserved hypothetical protein; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family.
   
    0.556
lptC
Conserved hypothetical protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA.
  
     0.518
argE
Acetylornithine deacetylase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
    0.466
ank2
Ankyrin-like protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.423
rimK
Ribosomal protein S6 modification protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
    0.419
Your Current Organism:
Xanthomonas oryzae
NCBI taxonomy Id: 291331
Other names: X. oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae str. KACC 10331, Xanthomonas oryzae pv. oryzae strain KACC 10331
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