Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
nifSCysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (414 aa)    
Predicted Functional Partners:
ynhD
ABC transporter ATP-binding protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
  
 0.992
XOO2679
SufE protein probably involved in Fe-S center assembly; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 0.990
ynhC
ABC transporter permease; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 
 0.987
ynhE
ABC transporter permease; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 
 0.970
trxB
Thioredoxin reductase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 
  0.922
metB-2
Cystathionine gamma-synthase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
     
 0.902
PaaD
Predicted metal-sulfur cluster biosynthetic enzyme; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
  
 0.722
XOO1406
Predicted transcriptional regulator; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
     0.641
bedB
Benzene 1,2-dioxygenase ferredoxin protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
       0.589
RimI-2
Acetyltransferases; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
       0.574
Your Current Organism:
Xanthomonas oryzae
NCBI taxonomy Id: 291331
Other names: X. oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae str. KACC 10331, Xanthomonas oryzae pv. oryzae strain KACC 10331
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