Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
XOO1492Cysteine protease; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (257 aa)    
Predicted Functional Partners:
pheA
Prephenate dehydratase; Catalyzes the Claisen rearrangement of chorismate to prephenate.
  
   
 0.669
slp
Outer membrane protein Slp; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
      
 0.656
XOO0708
Esterase/lipase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.654
pcp
Peptidoglycan-associated outer membrane lipoprotein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
      
 0.646
ompP6
Outer membrane protein P6 precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
      
 0.642
XOO1762
Leucin rich protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.637
avrBs2
Avirulence protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.636
XOO2049
Hypothetical protein; Putative; ORF located using Glimmer/Genemark.
  
 
  0.632
XOO4386
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.582
XOO1493
Putative transposase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
       0.572
Your Current Organism:
Xanthomonas oryzae
NCBI taxonomy Id: 291331
Other names: X. oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae str. KACC 10331, Xanthomonas oryzae pv. oryzae strain KACC 10331
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.