node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
XOO0175 | YSH1 | XOO0175 | XOO1876 | Topoisomerase IB; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | mRNA 3'-end processing factor; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | 0.572 |
XOO0175 | hisB | XOO0175 | XOO2258 | Topoisomerase IB; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | Imidazoleglycerolphosphate dehydratase/histidinol-phosphate phosphatase bifunctional enzyme; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; In the N-terminal section; belongs to the histidinol- phosphatase family. | 0.410 |
XOO0175 | lig2 | XOO0175 | XOO1875 | Topoisomerase IB; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | DNA ligase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | 0.714 |
XOO0175 | polA | XOO0175 | XOO4240 | Topoisomerase IB; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.467 |
XOO1873 | YSH1 | XOO1873 | XOO1876 | Predicted ICC-like phosphoesterases; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | mRNA 3'-end processing factor; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | 0.912 |
XOO1873 | lhr2 | XOO1873 | XOO1874 | Predicted ICC-like phosphoesterases; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | Helicase-related protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | 0.959 |
XOO1873 | lig2 | XOO1873 | XOO1875 | Predicted ICC-like phosphoesterases; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | DNA ligase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | 0.961 |
YSH1 | XOO0175 | XOO1876 | XOO0175 | mRNA 3'-end processing factor; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | Topoisomerase IB; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | 0.572 |
YSH1 | XOO1873 | XOO1876 | XOO1873 | mRNA 3'-end processing factor; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | Predicted ICC-like phosphoesterases; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | 0.912 |
YSH1 | lhr2 | XOO1876 | XOO1874 | mRNA 3'-end processing factor; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | Helicase-related protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | 0.902 |
YSH1 | lig2 | XOO1876 | XOO1875 | mRNA 3'-end processing factor; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | DNA ligase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | 0.993 |
YSH1 | polA | XOO1876 | XOO4240 | mRNA 3'-end processing factor; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.750 |
dnaN | exo | XOO0002 | XOO3638 | DNA polymerase III beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | Exodeoxyribonuclease IX; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | 0.943 |
dnaN | holB | XOO0002 | XOO0886 | DNA polymerase III beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | DNA polymerase III delta' subunit; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | 0.999 |
dnaN | lig1 | XOO0002 | XOO2410 | DNA polymerase III beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.447 |
dnaN | lig2 | XOO0002 | XOO1875 | DNA polymerase III beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | DNA ligase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | 0.985 |
dnaN | polA | XOO0002 | XOO4240 | DNA polymerase III beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.993 |
exo | dnaN | XOO3638 | XOO0002 | Exodeoxyribonuclease IX; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | DNA polymerase III beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 0.943 |
exo | holB | XOO3638 | XOO0886 | Exodeoxyribonuclease IX; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | DNA polymerase III delta' subunit; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | 0.773 |
exo | lig2 | XOO3638 | XOO1875 | Exodeoxyribonuclease IX; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | DNA ligase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. | 0.821 |