Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
oxyRHydrogen peroxide-inducible genes activator; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the LysR transcriptional regulatory family. (201 aa)    
Predicted Functional Partners:
soxR
Transcriptional regulator soxR family; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
      
 0.775
ahpC
Alkyl hydroperoxide reductase subunit C; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
     
 0.748
pcaQ
Transcriptional regulator; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the LysR transcriptional regulatory family.
  
     0.739
gbpR
Galactose-binding protein regulator; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the LysR transcriptional regulatory family.
  
     0.712
XOO0532
Transcriptional regulator lysR family; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the LysR transcriptional regulatory family.
  
     0.706
katE
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
      
 0.705
SoxR-2
MerR family transcriptional regulator; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
      
 0.693
ahpF
Alkyl hydroperoxide reductase subunit F; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
     
 0.689
SoxR
Predicted transcriptional regulators; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
      
 0.684
LysR-8
Transcriptional regulator; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the LysR transcriptional regulatory family.
  
     0.684
Your Current Organism:
Xanthomonas oryzae
NCBI taxonomy Id: 291331
Other names: X. oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae str. KACC 10331, Xanthomonas oryzae pv. oryzae strain KACC 10331
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