STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phoXAlkaline phosphatase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (709 aa)    
Predicted Functional Partners:
XOO1918
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.505
pntA-2
Pyridine nucleotide transhydrogenase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
     
  0.499
celD
Glucan 1,4-beta-glucosidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
       0.490
phoA
Alkaline phosphatase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the alkaline phosphatase family.
  
  
 0.487
PhnD
ABC-type phosphate/phosphonate transport system, periplasmic component; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
   
    0.420
XOO0627
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.414
sglT
Sodium/glucose cotransport protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.414
WcaG
Nucleoside-diphosphate-sugar epimerases; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.407
Your Current Organism:
Xanthomonas oryzae
NCBI taxonomy Id: 291331
Other names: X. oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae str. KACC 10331, Xanthomonas oryzae pv. oryzae strain KACC 10331
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.