Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
XOO2392Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (91 aa)    
Predicted Functional Partners:
phaF
Poly(hydroxyalcanoate) granule associated protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
     0.869
XOO2391
FOG: FHA domain; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
     0.788
XOO1096
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.651
XOO3941
Predicted outer membrane lipoprotein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.560
XOO1516
Predicted outer membrane lipoprotein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.547
ACH1
Acetyl-CoA hydrolase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.532
argF
Ornithine carbamoyltransferase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
     0.487
ElaA
Predicted acyltransferase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.427
XOO2930
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.423
Your Current Organism:
Xanthomonas oryzae
NCBI taxonomy Id: 291331
Other names: X. oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae str. KACC 10331, Xanthomonas oryzae pv. oryzae strain KACC 10331
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