Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
XOO2545Transglutaminase-like enzymes, putative cysteine proteases; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (642 aa)    
Predicted Functional Partners:
lolA
Outer-membrane lipoproteins carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
       0.773
RfaL
Lipid A core - O-antigen ligase and related enzymes; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.699
stkXac1
Serine/threonine kinase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.695
XOO2049
Hypothetical protein; Putative; ORF located using Glimmer/Genemark.
 
     0.694
XOO3300
Extracellular protease; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.689
gumF
GumF protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.660
alg2-2
Glycosyltransferase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.649
MdlB
ABC-type multidrug transport system, ATPase and permease components; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.632
yapH
YapH protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.631
fecA
TonB-dependent receptor; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.630
Your Current Organism:
Xanthomonas oryzae
NCBI taxonomy Id: 291331
Other names: X. oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae str. KACC 10331, Xanthomonas oryzae pv. oryzae strain KACC 10331
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