Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tlyCHemolysin; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (446 aa)    
Predicted Functional Partners:
exoD
ExoD protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
       0.803
XOO0165
Hemolysin III; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
     
 0.763
hly3
Hemolysin III; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
     
 0.763
pitA
Transport protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
   0.664
XOO2975
Phosphate transport regulator (distant homolog of PhoU); Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
     0.597
tolC
TolC protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
  
 0.461
XOO4241
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
  
 0.452
guaA
Glutamine amidotransferase; Catalyzes the synthesis of GMP from XMP.
     
 0.415
Your Current Organism:
Xanthomonas oryzae
NCBI taxonomy Id: 291331
Other names: X. oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae str. KACC 10331, Xanthomonas oryzae pv. oryzae strain KACC 10331
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.