STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XOO2978General stress protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (166 aa)    
Predicted Functional Partners:
yodB
Cytochrome B561; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
      
 0.802
yodB-2
Cytochrome B561; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
      
 0.802
CybB
Cytochrome B561; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
      
 0.729
XOO2979
Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
   
 0.669
aphB
Phytochrome-like protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.642
ybdR
Zn-dependent alcohol dehydrogenase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.636
XOO0436
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the UPF0337 (CsbD) family.
  
    0.590
XOO2347
Predicted acetyltransferase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
    0.579
sulA
Cell division inhibitor; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
   
    0.558
XOO0175
Topoisomerase IB; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
     0.516
Your Current Organism:
Xanthomonas oryzae
NCBI taxonomy Id: 291331
Other names: X. oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae str. KACC 10331, Xanthomonas oryzae pv. oryzae strain KACC 10331
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.