Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
XOO2983Mg-protoporphyrin IX monomethyl ester oxidative cyclase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (560 aa)    
Predicted Functional Partners:
UbiE-4
Methylase involved in ubiquinone/menaquinone biosynthesis; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
  
 0.764
MdlB
ABC-type multidrug transport system, ATPase and permease components; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
     0.653
HprK
Serine kinase of the HPr protein, regulates carbohydrate metabolism; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
       0.577
XOO2984
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
       0.564
SsnA-2
Cytosine deaminase and related metal-dependent hydrolases; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
     0.517
XOO3611
Transcriptional regulator; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
   
    0.505
XOO1487
Cysteine protease; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.473
XOO1480
Cysteine protease; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.464
HemN
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
  
 0.442
XOO2545
Transglutaminase-like enzymes, putative cysteine proteases; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.436
Your Current Organism:
Xanthomonas oryzae
NCBI taxonomy Id: 291331
Other names: X. oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae str. KACC 10331, Xanthomonas oryzae pv. oryzae strain KACC 10331
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.