Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
XOO3411Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (195 aa)    
Predicted Functional Partners:
draG
Dinitrogenase reductase activationg glycohydrolase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
    
 0.868
MGS1
ATPase related to the helicase subunit of the Holliday junction resolvase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
   0.660
cmk
Cytidylate kinase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
      0.584
STE14-4
Putative protein-S-isoprenylcysteine methyltransferase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
       0.484
rplX
50S ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
    
   0.421
rplK
50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
    
   0.421
Your Current Organism:
Xanthomonas oryzae
NCBI taxonomy Id: 291331
Other names: X. oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae str. KACC 10331, Xanthomonas oryzae pv. oryzae strain KACC 10331
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