Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
XOO3522Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (59 aa)    
Predicted Functional Partners:
XOO3520
Putative virion core protein (lumpy skin disease virus); Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
  
 0.976
XOO3521
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
       0.786
avrXa7
Avirulence/virulence protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
     
 0.606
purT
Phosphoribosylglycinamide formyltransferase 2; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family.
       0.593
VanY
D-alanyl-D-alanine carboxypeptidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
       0.560
hflK
Integral membrane protease subunit; HflC and HflK could encode or regulate a protease.
  
  
 0.420
hflC
Integral membrane proteinase subunit; HflC and HflK could regulate a protease.
  
  
 0.420
HflC
Membrane protease subunits, stomatin/prohibitin homologs; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
  
 0.420
Your Current Organism:
Xanthomonas oryzae
NCBI taxonomy Id: 291331
Other names: X. oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae str. KACC 10331, Xanthomonas oryzae pv. oryzae strain KACC 10331
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