Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
XOO3528Two-component system sensor protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (398 aa)    
Predicted Functional Partners:
CitB-4
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 
 0.974
CitB-2
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 
 0.820
gacA
Transcriptional regulator luxR/uhpA family; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 
 0.814
CitB
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 
 0.782
tcsR
Two-component system regulatory protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 
 0.770
XOO3529
Predicted acetyltransferase, GNAT superfamily; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
     0.679
XOO3526
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
     0.655
minC
Cell division inhibitor; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.
       0.619
CitB-3
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 
 0.612
minD
Septum site-determining protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
       0.586
Your Current Organism:
Xanthomonas oryzae
NCBI taxonomy Id: 291331
Other names: X. oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae str. KACC 10331, Xanthomonas oryzae pv. oryzae strain KACC 10331
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