Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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rbsKRibokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (356 aa)    
Predicted Functional Partners:
rpiA
Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
   
 0.963
PrsA
Phosphoribosylpyrophosphate synthetase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
   
 0.934
tktA
Transketolase 1; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
   
 0.930
RpiB
Ribose 5-phosphate isomerase RpiB; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
    
 0.910
algC
Phosphomannomutase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
     
 0.902
xanA
Phosphoglucomutase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
     
 0.902
URH1-2
Inosine-uridine nucleoside N-ribohydrolase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the IUNH family.
 
  
 0.868
yeiM
Nucleoside transporter; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
  
 0.862
URH1
Inosine-uridine nucleoside N-ribohydrolase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the IUNH family.
 
  
 0.820
bga
Beta-galactosidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
      
 0.740
Your Current Organism:
Xanthomonas oryzae
NCBI taxonomy Id: 291331
Other names: X. oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae str. KACC 10331, Xanthomonas oryzae pv. oryzae strain KACC 10331
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