Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dsbADisulfide oxidoreductase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (292 aa)    
Predicted Functional Partners:
dsbB
Disulfide bond formation protein B; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family.
 
 
 0.975
ElsH
Metal-dependent hydrolase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
    0.819
dsbC
Disulfide isomerase; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.
  
  
 0.797
PilW
Tfp pilus assembly protein PilW; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
   
 0.704
FtsN
Cell division protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
     0.663
dsbD
C-type cytochrome biogenesis protein (copper tolerance); Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
 
 0.661
smpA
Outer membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
  
 0.661
XOO1293
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
    0.650
XOO1292
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
    0.625
ostA-2
Organic solvent tolerance precursor; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
 
   
 0.621
Your Current Organism:
Xanthomonas oryzae
NCBI taxonomy Id: 291331
Other names: X. oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae str. KACC 10331, Xanthomonas oryzae pv. oryzae strain KACC 10331
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