Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
phSHistidine kinase-response regulator hybrid protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (357 aa)    
Predicted Functional Partners:
BaeS-5
Signal transduction histidine kinase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
   
 0.886
BaeS-2
Signal transduction histidine kinase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
    
 0.872
torS
Two-component system sensor protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
      0.809
rpfC
RpfC protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
   
 0.639
BaeS-3
Signal transduction histidine kinase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
 
 0.600
BaeS
Signal transduction histidine kinase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.558
XOO3936
Two-component system sensor protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 
 0.511
XOO4445
Predicted signal transduction protein containing sensor and EAL domains; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 
    0.503
XOO2708
GGDEF family protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
    
 0.467
osmC
Osmotically inducible protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
    0.459
Your Current Organism:
Xanthomonas oryzae
NCBI taxonomy Id: 291331
Other names: X. oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae str. KACC 10331, Xanthomonas oryzae pv. oryzae strain KACC 10331
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