Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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bfrBacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. (156 aa)    
Predicted Functional Partners:
Bfd
Bacterioferritin-associated ferredoxin; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 
 0.932
Bfr
Bacterioferritin (cytochrome b1); Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
  
  0.914
brf
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
  
  
 
0.914
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.909
XOO1090
Glutaredoxin-like protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
      
 0.545
nudH
Probable (di)nucleoside polyphosphate hydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.
       0.524
XOO3207
Glutaredoxin-related protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the glutaredoxin family. Monothiol subfamily.
      
 0.483
kbl
2-amino-3-ketobutyrate CoA ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.
      
 0.434
SpoIIAA
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
   
  
 0.432
spoIIAA
Anti-sigma F factor antagonist; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
   
  
 0.432
Your Current Organism:
Xanthomonas oryzae
NCBI taxonomy Id: 291331
Other names: X. oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae str. KACC 10331, Xanthomonas oryzae pv. oryzae strain KACC 10331
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