CspR protein (Xanthomonas oryzae) - STRING interaction network

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CspR

tRNA/rRNA methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide. (158 aa)

Predicted Functional Partners:

cspA

0.702

cspA-2

0.702

XOO4207

0.697

CspC

0.628

XOO2951

0.612

pepN-3

0.609

rlmH

0.578

micA

0.574

trmD

0.535

doc

0.480

Your Current Organism:

Xanthomonas oryzae

NCBI taxonomy Id: 291331
Other names: X. oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae str. KACC 10331, Xanthomonas oryzae pv. oryzae strain KACC 10331

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CspC	CspR	XOO4797	XOO4206	Cold shock proteins; Identified by sequence similarity; putative; ORF located using Blastx/FrameD.	tRNA/rRNA methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.	0.628
CspC	XOO2951	XOO4797	XOO2951	Cold shock proteins; Identified by sequence similarity; putative; ORF located using Blastx/FrameD.	Predicted RNA-binding protein containing KH domain, possibly ribosomal protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.	0.411
CspC	cspA	XOO4797	XOO1510	Cold shock proteins; Identified by sequence similarity; putative; ORF located using Blastx/FrameD.	Major cold shock protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.	0.684
CspC	cspA-2	XOO4797	XOO2721	Cold shock proteins; Identified by sequence similarity; putative; ORF located using Blastx/FrameD.	Major cold shock protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.	0.684
CspR	CspC	XOO4206	XOO4797	tRNA/rRNA methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.	Cold shock proteins; Identified by sequence similarity; putative; ORF located using Blastx/FrameD.	0.628
CspR	XOO2951	XOO4206	XOO2951	tRNA/rRNA methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.	Predicted RNA-binding protein containing KH domain, possibly ribosomal protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.	0.612
CspR	XOO4207	XOO4206	XOO4207	tRNA/rRNA methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.	Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.	0.697
CspR	cspA	XOO4206	XOO1510	tRNA/rRNA methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.	Major cold shock protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.	0.702
CspR	cspA-2	XOO4206	XOO2721	tRNA/rRNA methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.	Major cold shock protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.	0.702
CspR	doc	XOO4206	XOO3444	tRNA/rRNA methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.	Death-on-curing protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.	0.480
CspR	micA	XOO4206	XOO3373	tRNA/rRNA methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.	DNA mismatch repair protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.574
CspR	pepN-3	XOO4206	XOO3989	tRNA/rRNA methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.	Aminopeptidase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.	0.609
CspR	rlmH	XOO4206	XOO3322	tRNA/rRNA methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.	Conserved hypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.	0.578
CspR	trmD	XOO4206	XOO1327	tRNA/rRNA methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.	tRNA (guanine-N1-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.	0.535
XOO2951	CspC	XOO2951	XOO4797	Predicted RNA-binding protein containing KH domain, possibly ribosomal protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.	Cold shock proteins; Identified by sequence similarity; putative; ORF located using Blastx/FrameD.	0.411
XOO2951	CspR	XOO2951	XOO4206	Predicted RNA-binding protein containing KH domain, possibly ribosomal protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.	tRNA/rRNA methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.	0.612
XOO4207	CspR	XOO4207	XOO4206	Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.	tRNA/rRNA methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.	0.697
cspA	CspC	XOO1510	XOO4797	Major cold shock protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.	Cold shock proteins; Identified by sequence similarity; putative; ORF located using Blastx/FrameD.	0.684
cspA	CspR	XOO1510	XOO4206	Major cold shock protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.	tRNA/rRNA methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.	0.702
cspA-2	CspC	XOO2721	XOO4797	Major cold shock protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.	Cold shock proteins; Identified by sequence similarity; putative; ORF located using Blastx/FrameD.	0.684

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