Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
XOO4316Acyltransferase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (347 aa)    
Predicted Functional Partners:
AcpP
Acyl carrier protein; Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides.
 
   
 0.969
XOO4315
Hypothetical protein; Putative; ORF located using Glimmer/Genemark.
 
    0.956
FabA
3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
     0.954
actII-3
Membrane protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
  
 0.927
FixC-2
Dehydrogenases (flavoproteins); Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
   
 0.909
XOO4312
Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase; Putative; ORF located using Glimmer/Genemark.
 
   
 0.877
XOO4319
Ketosynthase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
     0.864
XOO4313
Putative inner membrane protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
  
 0.845
rapK
Pteridine-dependent deoxygenase like protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
     0.823
XOO0462
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
    0.814
Your Current Organism:
Xanthomonas oryzae
NCBI taxonomy Id: 291331
Other names: X. oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae str. KACC 10331, Xanthomonas oryzae pv. oryzae strain KACC 10331
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