Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AcrR-6AcrR family transcriptional regulator; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (169 aa)    
Predicted Functional Partners:
accD-2
acyl-CoA carboxyltransferase beta chain; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
   
 0.620
XOO4381
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
       0.610
CDA1-2
Polysaccharide deacetylase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
   
 0.508
AcrR-5
TetR/AcrR family transcriptional regulator; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.497
flgM
Flagellar protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.489
Hmp
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
  
 0.468
acdA-3
acyl-CoA dehydrogenase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
    0.467
XOO2839
Hypothetical protein; Putative; ORF located using Glimmer/Genemark.
  
     0.452
accC-2
Biotin carboxylase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
   
 
 0.451
XOO1921
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.441
Your Current Organism:
Xanthomonas oryzae
NCBI taxonomy Id: 291331
Other names: X. oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae str. KACC 10331, Xanthomonas oryzae pv. oryzae strain KACC 10331
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.