Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
zapEATPase; Reduces the stability of FtsZ polymers in the presence of ATP. (377 aa)    
Predicted Functional Partners:
XOO4393
Predicted hydrolase of the alpha/beta superfamily; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
       0.760
sdhB
Succinate dehydrogenase iron-sulfur protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
 
    0.737
sdhA
Succinate dehydrogenase flavoprotein subunit; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
 
    0.719
pcm-2
L-isoaspartate protein carboxylmethyltransferase type II; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.
      
 0.633
pcm
L-isoaspartate protein carboxylmethyltransferase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
      
 0.630
VgrG-6
Hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
      
 0.600
VgrG-7
Hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
      
 0.600
VgrG-14
Hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
      
 0.597
sdhC
Succinate dehydrogenase membrane anchor subunit; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
   
 0.561
rpsI
30S ribosomal protein S9; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the universal ribosomal protein uS9 family.
  
   0.543
Your Current Organism:
Xanthomonas oryzae
NCBI taxonomy Id: 291331
Other names: X. oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae str. KACC 10331, Xanthomonas oryzae pv. oryzae strain KACC 10331
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