STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DesAFatty acid desaturase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (373 aa)    
Predicted Functional Partners:
Hmp
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 0.999
desC
Delta 9 acyl-lipid fatty acid desaturase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
 0.928
OLE1
Fatty-acid desaturase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
   
 0.914
AcrR-7
TetR family transcriptional regulator; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
  
 0.913
fabA
beta-hydroxydecanoyl-ACP dehydratase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length.
     
 0.705
FabA
3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
     
 0.691
fabB
Beta-ketoacyl- synthase I; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
  
 0.679
CumB
Cytosine/adenosine deaminases; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
      
 0.652
rubA
Rubredoxin; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
  
 0.634
fadH
2,4-dienoyl-CoA reductase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
   
 0.570
Your Current Organism:
Xanthomonas oryzae
NCBI taxonomy Id: 291331
Other names: X. oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae str. KACC 10331, Xanthomonas oryzae pv. oryzae strain KACC 10331
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