Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
XOO4527Oxidoreductase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (304 aa)    
Predicted Functional Partners:
XOO4528
Quinone oxidoreductase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
 
 0.887
XOO4526
Hypothetical protein; Putative; ORF located using Glimmer/Genemark.
       0.773
mocA-2
Rhizopine catabolism protein mocA; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 
0.766
Tas-2
Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 
 0.756
Tas-3
Voltage-gated potassium channel beta subunit; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 
 0.672
ostB
Trehalose-6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
   0.593
osmC
Osmotically inducible protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
    0.553
Tas-4
Oxidoreductase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 
 0.532
Tas
Oxidoreductase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 
0.522
XOO4573
Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.
  
 
 0.466
Your Current Organism:
Xanthomonas oryzae
NCBI taxonomy Id: 291331
Other names: X. oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae str. KACC 10331, Xanthomonas oryzae pv. oryzae strain KACC 10331
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.