Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
cls-3Cardiolipin synthase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the phospholipase D family. Cardiolipin synthase subfamily. (472 aa)    
Predicted Functional Partners:
cls
Cardiolipin synthetase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
  
  
 
0.920
plcN
Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
     
 0.901
PlcC
Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
     
 0.901
SerB-2
Phosphoserine phosphatase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
     
 0.900
fldY
Transcriptional regulator; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the LysR transcriptional regulatory family.
       0.730
cls-2
Cardiolipin synthase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.711
MenG
Demethylmenaquinone methyltransferase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
       0.516
Your Current Organism:
Xanthomonas oryzae
NCBI taxonomy Id: 291331
Other names: X. oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae str. KACC 10331, Xanthomonas oryzae pv. oryzae strain KACC 10331
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