Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nodTOuter membrane efflux protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (225 aa)    
Predicted Functional Partners:
XOO4603
Predicted membrane protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
  
 0.883
slyA
Transcriptional regulator for cryptic hemolysin; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
  
 0.863
fasD
Outer membrane usher protein FasD; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
   
  
 0.781
oprN
Outer membrane protein OprN precursor; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
  
     0.726
pmrA
Multidrug resistance efflux pump; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 
 0.706
XOO1448
Pirin; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the pirin family.
      
 0.674
rmrA
Transport protein; Identified by sequence similarity; putative; ORF located using Blastx/FrameD.
 
 
 0.666
EmrA-4
Multidrug resistance efflux pump; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark.
 
 
 0.661
acrA
Multidrug resistance protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.656
AcrA
Membrane-fusion protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.631
Your Current Organism:
Xanthomonas oryzae
NCBI taxonomy Id: 291331
Other names: X. oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae str. KACC 10331, Xanthomonas oryzae pv. oryzae strain KACC 10331
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.