STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114046348Transcription factor. (411 aa)    
Predicted Functional Partners:
E2F1
E2F transcription factor 1.
   
 0.991
RB1
Uncharacterized protein.
   
 0.991
E2F4
E2F_TDP domain-containing protein.
   
 0.990
RBL1
Uncharacterized protein.
   
 0.989
RBL2
RB transcriptional corepressor like 2.
   
 0.989
E2F2
E2F transcription factor 2.
   
 0.984
E2F3
E2F_TDP domain-containing protein.
   
 0.983
E2F6
E2F_TDP domain-containing protein.
   
 0.979
ENSVURP00010023486
E2F_TDP domain-containing protein.
   
 0.979
ENSVURP00010028318
annotation not available
   
 0.979
Your Current Organism:
Vombatus ursinus
NCBI taxonomy Id: 29139
Other names: V. ursinus, coarse-haired wombat, common wombat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.