STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFCAB9EF-hand calcium binding domain 9. (213 aa)    
Predicted Functional Partners:
CATSPER3
Cation channel sperm associated 3.
    
 0.964
CATSPER2
Cation channel sperm associated 2.
  
 
 0.946
CASK
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.943
CATSPERZ
Uncharacterized protein.
    
 
 0.942
ENSVURP00010000764
Uncharacterized protein.
  
 
 
 0.938
ENSVURP00010027092
Uncharacterized protein.
  
 
 
 0.874
TMEM262
Transmembrane protein 262.
    
   0.872
ENSVURP00010027103
Uncharacterized protein.
  
 
 
 0.872
SLCO4C1
Solute carrier organic anion transporter family member.
   
 
 0.871
SLCO4A1
Solute carrier organic anion transporter family member.
   
 
 0.871
Your Current Organism:
Vombatus ursinus
NCBI taxonomy Id: 29139
Other names: V. ursinus, coarse-haired wombat, common wombat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.