Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSVURP00010022295 | GATB | ENSVURP00010022295 | ENSVURP00010015641 | annotation not available | Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily. | 0.992 |
ENSVURP00010022295 | LOC114049648 | ENSVURP00010022295 | ENSVURP00010013270 | annotation not available | Uncharacterized protein. | 0.999 |
ENSVURP00010022295 | MARS1 | ENSVURP00010022295 | ENSVURP00010030227 | annotation not available | Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.999 |
ENSVURP00010022295 | NARS1 | ENSVURP00010022295 | ENSVURP00010004655 | annotation not available | AA_TRNA_LIGASE_II domain-containing protein. | 0.998 |
ENSVURP00010022295 | WRN | ENSVURP00010022295 | ENSVURP00010015722 | annotation not available | Uncharacterized protein. | 0.422 |
ENSVURP00010022295 | YARS1 | ENSVURP00010022295 | ENSVURP00010026000 | annotation not available | Tyrosine--tRNA ligase. | 0.999 |
ENSVURP00010025895 | ERCC4 | ENSVURP00010025895 | ENSVURP00010011856 | annotation not available | ERCC4 domain-containing protein. | 0.882 |
ENSVURP00010025895 | LOC114029975 | ENSVURP00010025895 | ENSVURP00010014609 | annotation not available | Uncharacterized protein. | 0.993 |
ENSVURP00010025895 | NARS1 | ENSVURP00010025895 | ENSVURP00010004655 | annotation not available | AA_TRNA_LIGASE_II domain-containing protein. | 0.987 |
ENSVURP00010025895 | SLX1 | ENSVURP00010025895 | ENSVURP00010011023 | annotation not available | Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. Has a preference for 5'-flap structures, and promotes symmetrical cleavage of static and migrating Holliday junctions (HJs). Resolves HJs by generating two pairs of ligatable, nicked duplex products. | 0.990 |
ENSVURP00010025895 | WRN | ENSVURP00010025895 | ENSVURP00010015722 | annotation not available | Uncharacterized protein. | 0.999 |
ERCC4 | ENSVURP00010025895 | ENSVURP00010011856 | ENSVURP00010025895 | ERCC4 domain-containing protein. | annotation not available | 0.882 |
ERCC4 | LOC114029975 | ENSVURP00010011856 | ENSVURP00010014609 | ERCC4 domain-containing protein. | Uncharacterized protein. | 0.882 |
ERCC4 | NARS1 | ENSVURP00010011856 | ENSVURP00010004655 | ERCC4 domain-containing protein. | AA_TRNA_LIGASE_II domain-containing protein. | 0.987 |
ERCC4 | SLX1 | ENSVURP00010011856 | ENSVURP00010011023 | ERCC4 domain-containing protein. | Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. Has a preference for 5'-flap structures, and promotes symmetrical cleavage of static and migrating Holliday junctions (HJs). Resolves HJs by generating two pairs of ligatable, nicked duplex products. | 0.956 |
ERCC4 | WRN | ENSVURP00010011856 | ENSVURP00010015722 | ERCC4 domain-containing protein. | Uncharacterized protein. | 0.993 |
GATB | ENSVURP00010022295 | ENSVURP00010015641 | ENSVURP00010022295 | Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily. | annotation not available | 0.992 |
GATB | LOC114049648 | ENSVURP00010015641 | ENSVURP00010013270 | Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily. | Uncharacterized protein. | 0.992 |
GATB | MARS1 | ENSVURP00010015641 | ENSVURP00010030227 | Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily. | Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.633 |
GATB | NARS1 | ENSVURP00010015641 | ENSVURP00010004655 | Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily. | AA_TRNA_LIGASE_II domain-containing protein. | 0.995 |
page 1 of 4